STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T310_8249Uncharacterized protein. (229 aa)    
Predicted Functional Partners:
T310_3073
RRM domain-containing protein.
   
  0.702
T310_9305
mRNA splicing protein.
   
 
  0.699
T310_8858
MI domain-containing protein.
    
  0.674
T310_10106
RNA binding protein.
   
  0.653
T310_1868
Uncharacterized protein.
 
      0.653
T310_8367
mRNA splicing factor (Prp17).
   
 
  0.652
T310_2355
Uncharacterized protein.
   
 
  0.650
T310_0317
RNA annealing protein Yra1.
   
  0.647
T310_5407
Uncharacterized protein.
   
  0.607
T310_8263
mRNA splicing factor RNA helicase (Prp16).
    
  0.595
Your Current Organism:
Rasamsonia emersonii
NCBI taxonomy Id: 1408163
Other names: R. emersonii CBS 393.64, Rasamsonia emersonii CBS 393.64, Rasamsonia emersonii CBS393.64
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.