STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T310_8124Integral ER membrane protein Scs2. (290 aa)    
Predicted Functional Partners:
T310_0034
Oxysterol binding protein (Osh1); Belongs to the OSBP family.
    
 0.995
T310_8416
Oxysterol binding protein (Osh3).
    
 0.962
T310_8492
BAP31 domain protein.
   
 0.854
T310_3001
ER-Golgi SNARE complex subunit (Sed5).
    
 0.773
T310_8376
Asparagine synthase (Glutamine-hydrolyzing).
 
      0.759
T310_5088
SNARE domain protein.
    
 0.758
T310_0894
Translocon protein Sec61beta.
   
 0.748
T310_6319
Protein phosphatase 2c.
    
 0.741
T310_7372
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit WBP1; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the [...]
    
 0.732
T310_2623
Clock controled protein (Ccg-8).
   
 
 0.709
Your Current Organism:
Rasamsonia emersonii
NCBI taxonomy Id: 1408163
Other names: R. emersonii CBS 393.64, Rasamsonia emersonii CBS 393.64, Rasamsonia emersonii CBS393.64
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