STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T310_8033MYND-type domain-containing protein. (298 aa)    
Predicted Functional Partners:
T310_1891
Skp1_POZ domain-containing protein; Belongs to the SKP1 family.
     
 0.735
T310_1178
Ubiquitin--protein ligase; Belongs to the ubiquitin-conjugating enzyme family.
     
 0.612
T310_9607
26S proteasome regulatory particle subunit Rpn8.
    
  0.571
T310_4554
Proteasome regulatory particle subunit Rpt2; Belongs to the AAA ATPase family.
   
 
  0.568
T310_9283
Proteasome endopeptidase complex.
   
 
  0.567
T310_3384
Proteasome endopeptidase complex.
    
  0.560
T310_5155
26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
     
 0.517
T310_1549
RNase H domain protein.
 
      0.504
T310_4101
Nucleotide excision repair protein RAD23.
     
 0.450
T310_8476
N-acetyltransferase domain-containing protein.
   
    0.418
Your Current Organism:
Rasamsonia emersonii
NCBI taxonomy Id: 1408163
Other names: R. emersonii CBS 393.64, Rasamsonia emersonii CBS 393.64, Rasamsonia emersonii CBS393.64
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.