STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T310_7600Vacuolar protein 8. (229 aa)    
Predicted Functional Partners:
T310_6073
Vacuolar armadillo repeat protein Vac8.
 
    
0.918
T310_6420
Autophagy-related protein 13; Belongs to the ATG13 family. Fungi subfamily.
    
 
 0.873
T310_0614
Triacylglycerol lipase.
    
 
 0.870
T310_7206
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
    
 
 0.576
T310_3108
Non-specific serine/threonine protein kinase.
    
 
 0.493
T310_3666
Synaptobrevin; Belongs to the synaptobrevin family.
    
 
 0.456
T310_1779
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
 
      0.427
T310_3194
UPF0052 domain protein.
 
      0.423
T310_4671
Taz1-interacting factor 1 (TAF1).
    
 
 0.412
Your Current Organism:
Rasamsonia emersonii
NCBI taxonomy Id: 1408163
Other names: R. emersonii CBS 393.64, Rasamsonia emersonii CBS 393.64, Rasamsonia emersonii CBS393.64
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.