STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T310_7676Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family. (388 aa)    
Predicted Functional Partners:
T310_8002
50S ribosomal protein L2.
  
 0.998
T310_6016
50S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
  
 0.998
T310_10110
37S ribosomal protein S16.
   
 
 0.997
T310_9542
Mitochondrial large ribosomal subunit protein L16; Belongs to the universal ribosomal protein uL16 family.
  
 0.997
T310_7390
50S ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
  
 
 0.997
T310_4429
60S ribosomal protein L6; Belongs to the universal ribosomal protein uL6 family.
  
 0.997
T310_3214
Uncharacterized protein.
  
 0.997
T310_2694
37S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
  
 
 0.997
T310_1803
40S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.
  
 
 0.997
T310_1080
50S ribosomal subunit protein L15.
  
 0.997
Your Current Organism:
Rasamsonia emersonii
NCBI taxonomy Id: 1408163
Other names: R. emersonii CBS 393.64, Rasamsonia emersonii CBS 393.64, Rasamsonia emersonii CBS393.64
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.