STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T310_7254Uncharacterized protein. (786 aa)    
Predicted Functional Partners:
T310_3863
Peptidylprolyl isomerase.
    
   0.777
T310_4120
60S ribosomal protein L23.
    
   0.714
T310_2457
Ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.
    
   0.714
T310_0044
40S ribosomal protein S15; Belongs to the eukaryotic ribosomal protein P1/P2 family.
    
   0.714
T310_5135
40S ribosomal protein S19.
    
   0.708
T310_4759
40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
    
   0.707
T310_4101
Nucleotide excision repair protein RAD23.
   
   0.706
T310_10195
60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
    
   0.699
T310_10242
60S ribosomal protein L5.
    
   0.677
T310_0468
40S ribosomal protein S20.
    
   0.659
Your Current Organism:
Rasamsonia emersonii
NCBI taxonomy Id: 1408163
Other names: R. emersonii CBS 393.64, Rasamsonia emersonii CBS 393.64, Rasamsonia emersonii CBS393.64
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.