STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T310_7219Peptidase_S8 domain-containing protein. (1134 aa)    
Predicted Functional Partners:
T310_4688
Pepsin A; Belongs to the peptidase A1 family.
   
 0.780
T310_8242
RING-type domain-containing protein.
    
  0.552
T310_5025
RING finger domain protein.
    
  0.552
T310_4349
RING finger domain protein.
    
  0.552
T310_0618
RING finger protein.
    
  0.552
T310_0338
PrtT.
    
  0.552
T310_7832
Uncharacterized protein.
     
 0.530
T310_10208
Uncharacterized protein.
   
 
  0.487
T310_7728
Aspartic-type endopeptidase (CtsD); Belongs to the peptidase A1 family.
   
 0.484
T310_5697
Mitochondrial protein Fmp25.
   
 0.431
Your Current Organism:
Rasamsonia emersonii
NCBI taxonomy Id: 1408163
Other names: R. emersonii CBS 393.64, Rasamsonia emersonii CBS 393.64, Rasamsonia emersonii CBS393.64
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.