STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T310_7623Uncharacterized protein. (514 aa)    
Predicted Functional Partners:
T310_9276
Ribosomal assembly complex component Ipi3.
   
  0.530
T310_1420
rRNA processing protein Ipi1.
    
 0.518
T310_0603
40S ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family.
    
  0.476
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
  0.468
T310_7993
Uncharacterized protein.
    
  0.456
T310_3414
Calmodulin; Belongs to the calmodulin family.
    
  0.456
T310_0097
Uncharacterized protein.
    
  0.456
T310_3086
Calmodulin.
    
 0.447
T310_7253
ANK_REP_REGION domain-containing protein.
   
  0.440
T310_1954
GTP binding protein.
   
  0.438
Your Current Organism:
Rasamsonia emersonii
NCBI taxonomy Id: 1408163
Other names: R. emersonii CBS 393.64, Rasamsonia emersonii CBS 393.64, Rasamsonia emersonii CBS393.64
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