STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T310_6906Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids. (780 aa)    
Predicted Functional Partners:
T310_8484
AAA_23 domain-containing protein.
   
 0.997
T310_0634
DNA repair protein Nse1.
   
 0.997
T310_0217
DNA repair protein Rad18.
   
 0.997
T310_0159
Chromosomal organization and DNA repair protein Mms21.
    
 0.992
T310_0488
MAGE domain-containing protein.
   
 0.991
T310_7931
Uncharacterized protein.
   
 0.947
T310_0489
Galacturan 1,4-alpha-galacturonidase; Belongs to the glycosyl hydrolase 28 family.
   
 0.947
T310_3280
Chromosome segregation protein SudA.
   
 0.917
T310_7899
Uncharacterized protein.
   
 0.898
T310_0496
Chalcone_isomerase domain-containing protein.
   
 0.898
Your Current Organism:
Rasamsonia emersonii
NCBI taxonomy Id: 1408163
Other names: R. emersonii CBS 393.64, Rasamsonia emersonii CBS 393.64, Rasamsonia emersonii CBS393.64
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