STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T310_6854Uncharacterized protein. (181 aa)    
Predicted Functional Partners:
T310_0087
Nucleolar GTP-binding protein 1.
   
 
 0.906
T310_7930
Ribosome biogenesis protein RLP24.
   
 
 0.904
T310_2901
C2H2-type domain-containing protein.
   
 
 0.838
T310_6853
Regulatory protein SUAPRGA1.
 
      0.824
T310_3859
Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.
   
    0.822
T310_0057
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
   0.810
T310_7555
Ribosome biogenesis protein.
   
  
 0.809
T310_0349
Ribosomal biogenesis protein Gar2.
   
    0.806
T310_7533
U3 small nucleolar ribonucleoprotein IMP4.
   
    0.804
T310_6784
60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family.
   
 
 0.794
Your Current Organism:
Rasamsonia emersonii
NCBI taxonomy Id: 1408163
Other names: R. emersonii CBS 393.64, Rasamsonia emersonii CBS 393.64, Rasamsonia emersonii CBS393.64
Server load: low (22%) [HD]