STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T310_6821CoA_binding domain-containing protein. (536 aa)    
Predicted Functional Partners:
T310_8562
Uncharacterized protein.
    
 0.640
T310_0719
SAGA complex component (Sgf73).
    
 0.537
T310_1723
SAGA-like transcriptional regulatory complex subunit Spt3.
    
  0.527
T310_5438
Histone acetylase complex subunit Paf400; Belongs to the PI3/PI4-kinase family.
    
 0.518
T310_4350
Transcriptional regulator Ngg1.
    
 0.498
T310_1165
Transcription initiation factor TFIID subunit 12.
    
 0.490
T310_4493
TFIID and and SAGA complex TAF10 subunit.
    
  0.481
T310_1339
WD_REPEATS_REGION domain-containing protein.
    
 0.463
T310_1771
Transcription initiation factor TFIID, 31kD subunit.
    
  0.462
T310_4222
DlpA domain protein.
   
    0.461
Your Current Organism:
Rasamsonia emersonii
NCBI taxonomy Id: 1408163
Other names: R. emersonii CBS 393.64, Rasamsonia emersonii CBS 393.64, Rasamsonia emersonii CBS393.64
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.