STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T310_6533Uncharacterized protein. (498 aa)    
Predicted Functional Partners:
T310_2433
Leucine Rich Repeat domain protein.
    
 0.640
T310_3735
PT repeat family protein.
    
 0.575
T310_7253
ANK_REP_REGION domain-containing protein.
   
  0.514
T310_4930
Uncharacterized protein.
    
  0.498
T310_1761
Urea carboxylase.
    
  0.498
T310_8510
RanBP1 domain protein.
    
  0.461
T310_8190
Histone acetylase complex subunit MRG15-2.
    
  0.454
T310_5246
Uncharacterized protein.
    
  0.430
T310_4099
E3 ubiquitin ligase complex SCF subunit sconC; Belongs to the SKP1 family.
    
  0.430
T310_3384
Proteasome endopeptidase complex.
    
  0.423
Your Current Organism:
Rasamsonia emersonii
NCBI taxonomy Id: 1408163
Other names: R. emersonii CBS 393.64, Rasamsonia emersonii CBS 393.64, Rasamsonia emersonii CBS393.64
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.