STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T310_7171IFRD domain protein. (470 aa)    
Predicted Functional Partners:
T310_6514
Ubiquitin-like domain-containing protein.
    
  0.954
T310_4071
60S ribosomal protein L8.
    
 
 0.892
T310_6350
Ubiquitin.
    
  0.890
T310_0369
BZIP domain-containing protein.
    
  0.890
T310_5461
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
    
   0.883
T310_4623
60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family.
    
 
 0.883
T310_0876
60S ribosomal protein L20; Belongs to the eukaryotic ribosomal protein eL20 family.
    
 
 0.883
T310_0601
40S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
    
   0.883
RPS0
40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
   
   0.882
T310_10195
60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
    
 
 0.879
Your Current Organism:
Rasamsonia emersonii
NCBI taxonomy Id: 1408163
Other names: R. emersonii CBS 393.64, Rasamsonia emersonii CBS 393.64, Rasamsonia emersonii CBS393.64
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.