STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T310_6122AAA domain-containing protein. (704 aa)    
Predicted Functional Partners:
T310_1335
Nuclear protein localization protein 4.
   
 0.903
T310_9822
Cdc48-dependent protein degradation adaptor protein (Shp1).
   
 0.898
T310_0536
UBX domain-containing protein.
    
 0.897
T310_0226
OTU-like cysteine protease.
   
 0.892
T310_8502
Protein OS-9-like protein.
    
 0.888
T310_8424
UBX domain protein.
    
 0.884
T310_4624
UBX domain protein.
    
 0.884
T310_4632
Proteasome component C11.
   
 0.859
T310_8141
Ubiquitin fusion degradation protein Ufd1.
    
 0.834
T310_3952
AZUL domain-containing protein.
    
 0.834
Your Current Organism:
Rasamsonia emersonii
NCBI taxonomy Id: 1408163
Other names: R. emersonii CBS 393.64, Rasamsonia emersonii CBS 393.64, Rasamsonia emersonii CBS393.64
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.