STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T310_6354Uncharacterized protein. (416 aa)    
Predicted Functional Partners:
T310_4115
Pseudouridylate synthase family protein.
   
   0.722
T310_6353
Proteasome endopeptidase complex.
 
  
   0.706
T310_1209
60S ribosome biogenesis protein Rrp14.
   
   0.699
T310_0579
Protein MAK16; Belongs to the MAK16 family.
   
  
 0.659
T310_7406
rRNA processing protein (Ebp2).
   
    0.637
T310_4153
Uncharacterized protein.
   
   0.627
T310_3527
CCAAT-box-binding transcription factor.
   
   0.625
T310_0361
Ribosome biogenesis (Nop4).
   
   0.616
T310_9483
PUM-HD domain-containing protein.
   
  
 0.603
T310_6696
Small nucleolar ribonucleoprotein complex subunit Utp14.
   
    0.603
Your Current Organism:
Rasamsonia emersonii
NCBI taxonomy Id: 1408163
Other names: R. emersonii CBS 393.64, Rasamsonia emersonii CBS 393.64, Rasamsonia emersonii CBS393.64
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.