STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T310_5969Uncharacterized protein. (259 aa)    
Predicted Functional Partners:
T310_6079
U1 small nuclear ribonucleoprotein 70 kDa.
  
 0.738
T310_1069
Small nuclear ribonucleoprotein Sm D3.
   
 0.738
T310_5249
mRNA cleavage and polyadenylation specificity factor complex subunit (Pta1).
    
 0.736
T310_0093
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.718
T310_0923
DNA-directed RNA polymerase.
   
 
 0.714
T310_8130
Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.
    
  0.711
T310_10017
DUF866 domain protein.
    
  0.709
T310_5541
Uncharacterized protein.
    
  0.709
T310_4299
Sm domain-containing protein.
    
  0.707
T310_3200
Small nuclear ribonucleoprotein Sm D2.
    
  0.706
Your Current Organism:
Rasamsonia emersonii
NCBI taxonomy Id: 1408163
Other names: R. emersonii CBS 393.64, Rasamsonia emersonii CBS 393.64, Rasamsonia emersonii CBS393.64
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.