STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T310_5390Uncharacterized protein. (252 aa)    
Predicted Functional Partners:
T310_6498
DNA repair protein Mus81.
    
 0.611
T310_3735
PT repeat family protein.
    
 0.601
T310_8075
DNA-directed DNA polymerase.
    
 0.597
T310_1942
DNA polymerase.
   
 0.591
T310_0348
Uncharacterized protein.
    
 0.587
T310_7253
ANK_REP_REGION domain-containing protein.
   
  0.563
T310_4354
Uncharacterized protein.
    
 0.551
T310_0093
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
  0.547
T310_8510
RanBP1 domain protein.
    
  0.531
T310_8469
ERCC4 domain-containing protein.
    
 0.531
Your Current Organism:
Rasamsonia emersonii
NCBI taxonomy Id: 1408163
Other names: R. emersonii CBS 393.64, Rasamsonia emersonii CBS 393.64, Rasamsonia emersonii CBS393.64
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.