STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T310_5674C6 transcription factor. (723 aa)    
Predicted Functional Partners:
T310_3735
PT repeat family protein.
    
 0.760
T310_2433
Leucine Rich Repeat domain protein.
    
 0.695
T310_7482
PLA2c domain-containing protein.
    
  0.636
T310_1339
WD_REPEATS_REGION domain-containing protein.
    
  0.592
T310_1221
Autotransporter-associated beta strand repeat protein.
    
 0.591
T310_2425
Meiotic regulator-interacting protein.
    
 0.588
T310_9276
Ribosomal assembly complex component Ipi3.
    
  0.578
T310_4953
Uncharacterized protein.
    
 0.570
T310_8348
Protein transport protein (LST8).
    
 0.567
T310_1165
Transcription initiation factor TFIID subunit 12.
    
 0.567
Your Current Organism:
Rasamsonia emersonii
NCBI taxonomy Id: 1408163
Other names: R. emersonii CBS 393.64, Rasamsonia emersonii CBS 393.64, Rasamsonia emersonii CBS393.64
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