STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T310_5634Transporter protein smf2. (573 aa)    
Predicted Functional Partners:
T310_8314
mRNA-nucleus export ATPase (Elf1).
     
 0.718
T310_2244
Translation elongation factor eEF-3.
     
 0.714
T310_4718
Metal homeostatis protein bsd2.
   
 
 0.703
T310_4345
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.
    
  0.619
T310_4431
VHS domain protein.
 
 
    0.614
T310_0794
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
  
  
 0.603
T310_4129
Calcium-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family.
    
 0.568
T310_5844
Phosphodiesterase I.
   
 0.559
T310_2599
Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.
    
 
 0.525
T310_5405
Superoxide dismutase Cu-Zn.
     
 0.517
Your Current Organism:
Rasamsonia emersonii
NCBI taxonomy Id: 1408163
Other names: R. emersonii CBS 393.64, Rasamsonia emersonii CBS 393.64, Rasamsonia emersonii CBS393.64
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