STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T310_5389Ribosomal small subunit assembly protein. (326 aa)    
Predicted Functional Partners:
T310_7286
Small nucleolar ribonucleoprotein complex subunit.
   
 0.998
T310_0212
U3 small nucleolar RNA-associated protein 22.
   
 0.998
T310_6601
Ribosome biogenesis protein (Bms1).
   
 0.997
T310_3593
Small nucleolar ribonucleoprotein complex subunit.
   
 0.997
T310_0057
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.997
T310_7792
Fibrillarin.
   
 0.996
T310_5886
Small nucleolar ribonucleoprotein complex subunit (Pwp2).
   
 0.996
T310_4631
WD_REPEATS_REGION domain-containing protein.
   
 0.996
T310_4311
Small nucleolar ribonucleoprotein complex subunit.
   
 0.996
T310_4894
WD repeat protein.
   
 0.996
Your Current Organism:
Rasamsonia emersonii
NCBI taxonomy Id: 1408163
Other names: R. emersonii CBS 393.64, Rasamsonia emersonii CBS 393.64, Rasamsonia emersonii CBS393.64
Server load: low (22%) [HD]