STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T310_4576Malonate-semialdehyde dehydrogenase (Acetylating). (583 aa)    
Predicted Functional Partners:
T310_9517
3-hydroxyisobutyrate dehydrogenase.
   
 0.943
T310_5761
Uncharacterized protein.
   
 0.943
T310_9937
3-hydroxyisobutyrate dehydrogenase.
   
 0.936
T310_8338
Malate synthase; Belongs to the malate synthase family.
   
 
 0.924
T310_5976
Aldehyde dehydrogenase (NAD(+)).
  
0.924
T310_4752
Acetyl-CoA C-acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
   
 0.923
T310_4221
Acetyl-CoA C-acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
   
 0.923
T310_3072
Aldehyde dehydrogenase (NAD(+)); Belongs to the aldehyde dehydrogenase family.
  
0.922
T310_1656
Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family.
  
0.922
T310_8016
Acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
   
 0.920
Your Current Organism:
Rasamsonia emersonii
NCBI taxonomy Id: 1408163
Other names: R. emersonii CBS 393.64, Rasamsonia emersonii CBS 393.64, Rasamsonia emersonii CBS393.64
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