STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T310_3998AMMECR1 family protein. (355 aa)    
Predicted Functional Partners:
T310_5901
Alpha-1,3-glucanase.
  
    0.590
T310_4315
DUF52 domain protein.
  
    0.590
T310_1030
Stress response protein (Ish1).
   
    0.541
T310_0520
Alpha,alpha-trehalose-phosphate synthase (UDP-forming).
   
    0.534
T310_10109
YjeF N-terminal domain-containing protein.
   
  
 0.508
T310_1162
Hexaprenyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
      0.453
T310_5996
RNA binding protein.
   
    0.422
T310_0798
Alpha,alpha-trehalose-phosphate synthase (UDP-forming).
   
    0.420
T310_4275
DNA-formamidopyrimidine glycosylase.
      
 0.412
Your Current Organism:
Rasamsonia emersonii
NCBI taxonomy Id: 1408163
Other names: R. emersonii CBS 393.64, Rasamsonia emersonii CBS 393.64, Rasamsonia emersonii CBS393.64
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.