STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T310_4325Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate. (510 aa)    
Predicted Functional Partners:
T310_5070
Delta-1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 0.877
T310_5067
Proline utilization protein PrnX.
 
 
 0.874
T310_9552
Pyrroline-5-carboxylate reductase; Belongs to the pyrroline-5-carboxylate reductase family.
  
 0.827
T310_0820
Ornithine aminotransferase.
    
 0.770
T310_6675
PUA domain-containing protein.
    
 0.763
T310_7441
Aspartate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
    
 0.757
T310_8494
Acyl-CoA:6-aminopenicillanic-acid-acyltransferase.
    
 0.743
T310_5447
Glutamate-5-semialdehyde dehydrogenase.
    
 0.742
T310_7257
Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family.
    
 0.731
T310_3526
Neutral amino acid permease.
   
 
 0.724
Your Current Organism:
Rasamsonia emersonii
NCBI taxonomy Id: 1408163
Other names: R. emersonii CBS 393.64, Rasamsonia emersonii CBS 393.64, Rasamsonia emersonii CBS393.64
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