STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T310_4224Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (1174 aa)    
Predicted Functional Partners:
T310_0541
3'-5' exonuclease/helicase (Wrn).
    
 0.972
T310_0436
Uncharacterized protein.
    
 0.938
T310_5438
Histone acetylase complex subunit Paf400; Belongs to the PI3/PI4-kinase family.
   
 0.924
T310_0986
PHD finger domain protein.
    
 0.902
T310_4516
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.901
T310_5468
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
   
 0.900
T310_8190
Histone acetylase complex subunit MRG15-2.
    
 0.898
T310_5238
Histone acetyltransferase.
    
 0.895
T310_4476
SWR1-complex protein 4.
   
 0.858
T310_2696
Enhancer of polycomb-like protein.
    
 0.853
Your Current Organism:
Rasamsonia emersonii
NCBI taxonomy Id: 1408163
Other names: R. emersonii CBS 393.64, Rasamsonia emersonii CBS 393.64, Rasamsonia emersonii CBS393.64
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.