STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T310_3324SUN domain protein (Uth1). (424 aa)    
Predicted Functional Partners:
T310_3322
Transcription factor Tos4.
 
 
  0.565
T310_7490
Actin polymerization protein Bzz1.
 
  
  0.560
T310_9276
Ribosomal assembly complex component Ipi3.
   
  0.530
T310_1420
rRNA processing protein Ipi1.
    
 0.518
T310_9999
Exosomal 3'-5' exoribonuclease complex.
    
 0.500
T310_8596
Cell wall biogenesis protein phosphatase Ssd1.
    
 0.500
T310_0603
40S ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family.
    
  0.476
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
  0.468
T310_5177
Exosome complex exonuclease exoribonuclease (Rrp44); Belongs to the RNR ribonuclease family.
    
 0.458
T310_7993
Uncharacterized protein.
    
  0.456
Your Current Organism:
Rasamsonia emersonii
NCBI taxonomy Id: 1408163
Other names: R. emersonii CBS 393.64, Rasamsonia emersonii CBS 393.64, Rasamsonia emersonii CBS393.64
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.