STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T310_3306Annexin. (441 aa)    
Predicted Functional Partners:
T310_3305
EBP domain protein.
 
      0.812
T310_1221
Autotransporter-associated beta strand repeat protein.
    
 0.696
T310_8246
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.615
T310_3670
Profilin; Belongs to the profilin family.
   
 
 0.598
T310_2599
Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.
    
 0.581
T310_4379
Actin-related protein ArpA; Belongs to the actin family.
    
 0.571
T310_1433
Actin, gamma.
    
 0.571
T310_3602
Uncharacterized protein.
   
 
  0.541
T310_4451
C2H2 type zinc finger domain protein.
    
 
 0.535
T310_7044
DNA directed RNA polymerase II 15 kDa subunit.
    
 0.528
Your Current Organism:
Rasamsonia emersonii
NCBI taxonomy Id: 1408163
Other names: R. emersonii CBS 393.64, Rasamsonia emersonii CBS 393.64, Rasamsonia emersonii CBS393.64
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.