STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T310_3843Chromo domain-containing protein. (167 aa)    
Predicted Functional Partners:
T310_3451
Gag/polymerase/env polyprotein.
 
     0.766
T310_5879
WD_REPEATS_REGION domain-containing protein.
    
 0.643
T310_8628
Pol polyprotein.
 
     0.637
T310_6649
Putative replication factor-a protein.
   
 0.624
T310_9467
Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.
    
 0.623
T310_8469
ERCC4 domain-containing protein.
    
  0.573
T310_1342
DNA helicase.
    
  0.573
T310_6498
DNA repair protein Mus81.
    
  0.523
T310_0360
Mating-type switch/DNA repair protein Swi10/Rad10.
    
  0.521
T310_1335
Nuclear protein localization protein 4.
    
  0.515
Your Current Organism:
Rasamsonia emersonii
NCBI taxonomy Id: 1408163
Other names: R. emersonii CBS 393.64, Rasamsonia emersonii CBS 393.64, Rasamsonia emersonii CBS393.64
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.