STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T310_3552Uncharacterized protein. (272 aa)    
Predicted Functional Partners:
T310_0220
RF_PROK_I domain-containing protein.
  
 
 0.919
T310_0554
Peptidyl-tRNA hydrolase domain protein.
  
 
 0.908
T310_0760
Nicotinamide phosphoribosyltransferase.
  
 
 0.908
T310_4118
Eukaryotic peptide chain release factor subunit 1.
    
 0.869
T310_9601
Coproporphyrinogen oxidase.
   
 
 0.790
T310_0794
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
    
 0.781
T310_3544
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP.
    
 0.754
T310_9527
H(+)-transporting two-sector ATPase.
  
   0.719
T310_1707
Translation release factor eRF3.
    
 0.712
T310_7156
H(+)-transporting two-sector ATPase; Belongs to the ATPase C chain family.
  
   0.706
Your Current Organism:
Rasamsonia emersonii
NCBI taxonomy Id: 1408163
Other names: R. emersonii CBS 393.64, Rasamsonia emersonii CBS 393.64, Rasamsonia emersonii CBS393.64
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