STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T310_3137Trasncription factor BlrA. (687 aa)    
Predicted Functional Partners:
T310_2647
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
  0.718
T310_6396
Nucleoside diphosphate kinase.
    
  0.539
T310_0099
Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.
    
 0.533
T310_7253
ANK_REP_REGION domain-containing protein.
    
  0.527
T310_0468
40S ribosomal protein S20.
    
  0.518
T310_1989
37S ribosomal protein S11.
    
  0.515
T310_1211
40S ribosomal protein S2.
   
  0.514
T310_10110
37S ribosomal protein S16.
   
  0.513
T310_2694
37S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
    
  0.512
T310_2375
30S ribosomal protein S15.
   
  0.512
Your Current Organism:
Rasamsonia emersonii
NCBI taxonomy Id: 1408163
Other names: R. emersonii CBS 393.64, Rasamsonia emersonii CBS 393.64, Rasamsonia emersonii CBS393.64
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