STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T310_3263Uncharacterized protein. (1039 aa)    
Predicted Functional Partners:
T310_2433
Leucine Rich Repeat domain protein.
    
 0.839
T310_4506
Glycerophosphocholine phosphodiesterase Gde1.
    
 0.771
T310_2891
Stress response regulator/HFS transcription factor.
    
 0.734
T310_6018
Uncharacterized protein.
    
 0.716
T310_3735
PT repeat family protein.
   
 0.715
T310_4953
Uncharacterized protein.
   
 0.702
T310_10102
HAD superfamily hydrolase.
    
 0.688
T310_1491
Developmental regulator FlbA.
   
 0.687
T310_1221
Autotransporter-associated beta strand repeat protein.
   
 0.687
T310_1668
G protein complex beta subunit SfaD.
   
 0.684
Your Current Organism:
Rasamsonia emersonii
NCBI taxonomy Id: 1408163
Other names: R. emersonii CBS 393.64, Rasamsonia emersonii CBS 393.64, Rasamsonia emersonii CBS393.64
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.