STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T310_3043Glyoxal oxidase. (731 aa)    
Predicted Functional Partners:
T310_4177
Rho guanyl nucleotide exchange factor.
    
 0.784
T310_1342
DNA helicase.
    
 0.682
T310_7826
Nuclear transport factor NTF-2.
    
 0.670
T310_1335
Nuclear protein localization protein 4.
    
 0.669
T310_8469
ERCC4 domain-containing protein.
    
 0.635
T310_6157
ER membrane protein Wsc4.
     
 0.635
T310_9467
Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.
    
  0.604
T310_4683
Uncharacterized protein.
    
  0.600
T310_1006
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
    
  0.600
T310_7995
Ribonucleases P/MRP protein subunit.
    
 0.591
Your Current Organism:
Rasamsonia emersonii
NCBI taxonomy Id: 1408163
Other names: R. emersonii CBS 393.64, Rasamsonia emersonii CBS 393.64, Rasamsonia emersonii CBS393.64
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.