STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T310_2765HLH transcription factor. (616 aa)    
Predicted Functional Partners:
T310_7826
Nuclear transport factor NTF-2.
    
  0.751
T310_4683
Uncharacterized protein.
    
  0.690
T310_1006
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
    
  0.690
T310_7870
Uncharacterized protein.
    
 0.656
T310_1178
Ubiquitin--protein ligase; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.639
T310_3163
Geranylgeranyl transferase beta subunit.
    
 
 0.519
T310_5520
[Tau protein] kinase.
    
 
 0.505
T310_6018
Uncharacterized protein.
      
 0.444
T310_4506
Glycerophosphocholine phosphodiesterase Gde1.
      
 0.444
T310_8177
Ubiquitin--protein ligase; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.439
Your Current Organism:
Rasamsonia emersonii
NCBI taxonomy Id: 1408163
Other names: R. emersonii CBS 393.64, Rasamsonia emersonii CBS 393.64, Rasamsonia emersonii CBS393.64
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