STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T310_2280Glucose-methanol-choline oxidoreductase. (607 aa)    
Predicted Functional Partners:
T310_3846
Betaine-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 
 
 0.747
T310_9286
Aminoalcoholphosphotransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.729
T310_2782
Sn-1,2-diacylglycerol cholinephosphotransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.729
T310_7482
PLA2c domain-containing protein.
    
  0.640
T310_1857
Phospholipase C.
    
  0.597
T310_6018
Uncharacterized protein.
    
 0.587
T310_7170
Anterior fat body protein.
   
 
 0.557
T310_0128
Calcium homeostasis protein Regucalcin.
   
 
 0.557
T310_4282
Gluconokinase; Belongs to the gluconokinase GntK/GntV family.
     
 0.539
T310_5442
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
   
 
  0.514
Your Current Organism:
Rasamsonia emersonii
NCBI taxonomy Id: 1408163
Other names: R. emersonii CBS 393.64, Rasamsonia emersonii CBS 393.64, Rasamsonia emersonii CBS393.64
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