STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T310_1489PHD Zn-finger containing protein. (1106 aa)    
Predicted Functional Partners:
T310_2929
LisH domain-containing protein.
    
 
 0.938
T310_9261
Histone-lysine N-methyltransferase (Ash1).
   
 0.884
T310_4104
Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. SET2 subfamily.
   
 0.833
T310_2589
Uncharacterized protein.
    
 0.833
T310_9001
MYB DNA-binding domain protein.
   
 
 0.822
T310_9011
MYB DNA-binding domain protein.
   
 
 0.822
T310_0045
SET domain-containing protein.
    
 0.798
T310_4286
Histone-lysine N-methyltransferase, H3 lysine-4 specific; Catalytic component of the COMPASS (Set1C) complex that specifically mono-, di- and trimethylates histone H3 to form H3K4me1/2/3, which subsequently plays a role in telomere length maintenance and transcription elongation regulation.
    
 0.791
T310_4932
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.779
T310_5647
Histone H3; Belongs to the histone H3 family.
    
 0.769
Your Current Organism:
Rasamsonia emersonii
NCBI taxonomy Id: 1408163
Other names: R. emersonii CBS 393.64, Rasamsonia emersonii CBS 393.64, Rasamsonia emersonii CBS393.64
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.