STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T310_1416GATA transcriptional activator AreA. (1244 aa)    
Predicted Functional Partners:
T310_7235
NmrA domain-containing protein.
    
 
 0.995
T310_0288
Importin subunit alpha.
    
 
 0.886
T310_7830
MCMA protein.
    
 0.869
T310_5207
PtaB protein.
    
 0.808
T310_5355
Siderophore transcription factor SreA.
     
0.784
T310_2646
Nitrite reductase (NAD(P)H).
   
  
 0.754
T310_2647
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
 
 0.709
T310_5033
GATA transcription factor (AreB).
  
 
0.707
T310_4927
RNA polymerase I and III transcription factor complex component Tbp.
   
 0.700
T310_2750
Cross-pathway control protein A.
    
 0.695
Your Current Organism:
Rasamsonia emersonii
NCBI taxonomy Id: 1408163
Other names: R. emersonii CBS 393.64, Rasamsonia emersonii CBS 393.64, Rasamsonia emersonii CBS393.64
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.