STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T310_1409DLH domain-containing protein. (1347 aa)    
Predicted Functional Partners:
T310_8409
Alcohol dehydrogenase.
  
 
 0.617
T310_2733
Maleylacetate reductase.
  
 
 0.617
T310_0846
Maleylacetate reductase.
  
 
 0.617
T310_0196
Alcohol dehydrogenase.
  
 
 0.617
T310_3925
3-hydroxybutyryl-CoA dehydrogenase.
   
 
  0.594
T310_1360
3-hydroxybutyryl-CoA dehydrogenase.
   
 
  0.594
T310_4378
3-hydroxyacyl-CoA dehyrogenase.
   
 
  0.576
T310_1993
Chromo domain-containing protein.
   
 
  0.542
T310_0557
Enoyl-CoA hydratase.
   
 
  0.542
T310_1625
Palmitoyl-protein hydrolase.
  
 
 0.535
Your Current Organism:
Rasamsonia emersonii
NCBI taxonomy Id: 1408163
Other names: R. emersonii CBS 393.64, Rasamsonia emersonii CBS 393.64, Rasamsonia emersonii CBS393.64
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.