STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T310_0794Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. (422 aa)    
Predicted Functional Partners:
T310_2879
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
 
 
 0.996
T310_6563
Mitochondrial chaperone Frataxin.
    
 0.973
T310_0914
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
 
  
 0.959
T310_9700
Protoheme IX farnesyltransferase, mitochondrial.
   
 
 0.940
T310_3947
Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c.
     
 0.892
T310_2068
Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c.
     
 0.892
T310_0155
Cytochrome c oxidase assembly protein cox15.
  
 
 0.884
T310_7017
Heme-binding peroxidase.
    
 0.834
T310_9601
Coproporphyrinogen oxidase.
     
 0.784
T310_10091
RNA methyltransferase.
    
 0.781
Your Current Organism:
Rasamsonia emersonii
NCBI taxonomy Id: 1408163
Other names: R. emersonii CBS 393.64, Rasamsonia emersonii CBS 393.64, Rasamsonia emersonii CBS393.64
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