STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T310_0755ATP-dependent RNA helicase (Hrh1). (805 aa)    
Predicted Functional Partners:
T310_9989
Sas10 domain-containing protein.
   
 0.992
T310_7330
DEAH-box RNA helicase (Dhr1).
  
0.991
T310_6696
Small nucleolar ribonucleoprotein complex subunit Utp14.
   
 0.991
T310_6578
RNA helicase; Belongs to the DEAD box helicase family.
   
 0.991
T310_0649
rRNA processing protein Bystin.
   
 
 0.991
T310_5213
Nop14-like family protein.
 
 
  0.990
T310_3593
Small nucleolar ribonucleoprotein complex subunit.
   
 0.990
T310_2020
U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2.
   
 0.990
T310_4894
WD repeat protein.
   
 
 0.989
T310_4508
Pre-mRNA splicing factor ATP-dependent RNA helicase Prp43.
  
0.989
Your Current Organism:
Rasamsonia emersonii
NCBI taxonomy Id: 1408163
Other names: R. emersonii CBS 393.64, Rasamsonia emersonii CBS 393.64, Rasamsonia emersonii CBS393.64
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.