STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T310_004440S ribosomal protein S15; Belongs to the eukaryotic ribosomal protein P1/P2 family. (334 aa)    
Predicted Functional Partners:
T310_8468
Eukaryotic translation initiation factor eIF-1A subunit; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.
  
 0.999
T310_8382
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
 0.999
T310_7392
Ribosomal protein of the small subunit rps28; Belongs to the universal ribosomal protein uS12 family.
  
 0.999
T310_6807
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
  
 0.999
T310_6514
Ubiquitin-like domain-containing protein.
   
 0.999
T310_6296
40S ribosomal protein S9.
  
 0.999
T310_6328
Ribosomal protein S8; Belongs to the universal ribosomal protein uS8 family.
  
 0.999
T310_5548
Molybdopterin synthase sulfur carrier subunit.
   
 0.999
T310_5461
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 0.999
T310_5822
Ribosomal protein S13p/S18e; Belongs to the universal ribosomal protein uS13 family.
  
 0.999
Your Current Organism:
Rasamsonia emersonii
NCBI taxonomy Id: 1408163
Other names: R. emersonii CBS 393.64, Rasamsonia emersonii CBS 393.64, Rasamsonia emersonii CBS393.64
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.