STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T310_0376Proteasome regulatory particle subunit Rpt1; Belongs to the AAA ATPase family. (438 aa)    
Predicted Functional Partners:
T310_9607
26S proteasome regulatory particle subunit Rpn8.
   
 0.999
T310_9731
VWFA domain-containing protein.
   
 0.999
T310_9283
Proteasome endopeptidase complex.
   
 0.999
T310_7320
Proteasome endopeptidase complex; Belongs to the AAA ATPase family.
  
0.999
T310_5155
26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
   
 0.999
T310_4689
Proteasome endopeptidase complex; Belongs to the AAA ATPase family.
  
0.999
T310_4554
Proteasome regulatory particle subunit Rpt2; Belongs to the AAA ATPase family.
  
0.999
T310_3954
Proteasome regulatory particle subunit Rpt6; Belongs to the AAA ATPase family.
  
0.999
T310_3384
Proteasome endopeptidase complex.
   
 0.999
T310_3155
Proteasome endopeptidase complex; Belongs to the AAA ATPase family.
  
0.999
Your Current Organism:
Rasamsonia emersonii
NCBI taxonomy Id: 1408163
Other names: R. emersonii CBS 393.64, Rasamsonia emersonii CBS 393.64, Rasamsonia emersonii CBS393.64
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