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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EST55338.1S-layer protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1713 aa)    
Predicted Functional Partners:
EST56699.1
Polysaccharide pyruvyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.817
EST55341.1
Middle cell wall protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.813
EST51765.1
Copper amine oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.781
EST56142.1
Copper amine oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.776
EST52819.1
S-layer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.762
EST56300.1
S-layer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.761
EST56355.1
Copper amine oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.759
EST52467.1
S-layer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.755
EST54419.1
Copper amine oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.749
EST55392.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.745
Your Current Organism:
Brevibacillus panacihumi
NCBI taxonomy Id: 1408254
Other names: B. panacihumi W25, Brevibacillus panacihumi W25
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