STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EST54299.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (165 aa)    
Predicted Functional Partners:
EST54300.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.746
sspI
Spore protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SspI family.
  
    0.678
EST52848.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.636
EST52868.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.610
EST55035.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.575
EST53638.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.575
EST51596.1
Spore germination protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.554
EST54298.1
Adenine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.535
EST54301.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.525
EST51757.1
Protein sspF; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.525
Your Current Organism:
Brevibacillus panacihumi
NCBI taxonomy Id: 1408254
Other names: B. panacihumi W25, Brevibacillus panacihumi W25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.