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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EST53764.1Peptidase S8; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S8 family. (1151 aa)    
Predicted Functional Partners:
EST53763.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
EST53496.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S8 family.
  
     0.765
EST56757.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 0.658
EST53899.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 0.658
EST53762.1
Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.559
EST55786.1
Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ATP-dependent AMP-binding enzyme family.
 
  
 0.508
EST53758.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.504
EST53759.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.498
EST55604.1
Phage-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.492
EST56345.1
Peptidase S8; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S8 family.
  
 
 
0.480
Your Current Organism:
Brevibacillus panacihumi
NCBI taxonomy Id: 1408254
Other names: B. panacihumi W25, Brevibacillus panacihumi W25
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