STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nuoK-2NADH-ubiquinone oxidoreductase subunit 4L. (106 aa)    
Predicted Functional Partners:
echB
NADH dehydrogenase subunit H, ech hydrogenase subunit B.
 
 
 0.999
hydB
NAD-dependent FeFe-hydrogenase 51kDa NADH dehydrogenase component.
  
 
 0.999
nuoK
Putative NADH dehydrogenase (Quinone).
 
 
 0.959
nuoL
NADH:ubiquinone oxidoreductase, membrane subunit L.
 
 
 0.957
echF
4Fe-4S ferredoxin, iron-sulfur binding domain protein (modular protein) ech hydrogenase subunit F.
  
 
 0.956
hydA
[FeFe]-hydrogenase, NADP-reducing hydrogenase large subunit.
  
 
 0.894
hydB-2
NAD-dependent FeFe-hydrogenase 51kDa NADH dehydrogenase component.
  
 
 0.890
etfA
Electron transfer flavoprotein subunit alpha.
  
 
 0.872
nuoC
Ni,Fe-hydrogenase III large subunit.
 
     0.853
hydC
NAD-dependent Fe-hydrogenase 24kDa NADH dehydrogenase component.
  
 
 0.849
Your Current Organism:
Endomicrobium proavitum
NCBI taxonomy Id: 1408281
Other names: Candidatus Endomicrobium sp. Rsa215, DSM 29378, E. proavitum, Endomicrobium proavitum Zheng et al. 2018, JCM 30189, JCM 32103, strain Rsa215
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