STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Epro_0088Putative P-loop-containing kinase; Displays ATPase and GTPase activities. (286 aa)    
Predicted Functional Partners:
ptsN
Nitrogen regulatory protein PtsN.
  
  
 0.920
hprK
Serine/threonine protein kinase/phosphorylase; Catalyzes the ATP- as well as the pyrophosphate-dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK/P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P-Ser-HPr).
     
 0.796
yhbH
Sigma 54 modulation protein/ribosomal protein S30EA.
 
  
 0.778
cafA
Ribonuclease G.
   
 
 0.686
glmM
Phosphoglucosamine mutase.
 
   
 0.576
lptB
Putative lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily.
       0.469
kdsB
3-deoxy-manno-octulosonate cytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.
       0.435
kdsA
2-dehydro-3-deoxyphosphooctonate aldolase; Belongs to the KdsA family.
       0.435
kdsC
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase.
       0.435
lptC
Lipopolysaccharide-assembly, LptC-related.
       0.416
Your Current Organism:
Endomicrobium proavitum
NCBI taxonomy Id: 1408281
Other names: Candidatus Endomicrobium sp. Rsa215, DSM 29378, E. proavitum, Endomicrobium proavitum Zheng et al. 2018, JCM 30189, JCM 32103, strain Rsa215
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