STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Epro_03372-oxoglutarate synthase beta subunit. (247 aa)    
Predicted Functional Partners:
Epro_0335
Putative flavodoxin/ferredoxin oxidoreductase gamma subunit.
 0.999
vorB
Ketoisovalerate oxidoreductase subunit VorB.
 0.999
ydbK
Putative 2-oxoacid-flavodoxin fused oxidoreductase:conserved protein.
  
 0.999
vorD
2-oxoglutarate synthase delta subunit.
 
 
 0.990
ldh
L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.
  
 
 0.927
pta
Phosphate acetyltransferase.
   
 0.918
pykF
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
 0.915
ppdK
Pyruvate, phosphate dikinase; Belongs to the PEP-utilizing enzyme family.
    
 0.911
ytsJ
Putative NAD-dependent malic enzyme 4.
     
 0.908
acs
AMP-dependent synthetase and ligase.
  
 
 0.908
Your Current Organism:
Endomicrobium proavitum
NCBI taxonomy Id: 1408281
Other names: Candidatus Endomicrobium sp. Rsa215, DSM 29378, E. proavitum, Endomicrobium proavitum Zheng et al. 2018, JCM 30189, JCM 32103, strain Rsa215
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