STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tadBFlp pilus assembly protein TadB. (280 aa)    
Predicted Functional Partners:
Epro_0438
Putative Type II secretion system F domain protein.
 
  
 0.999
Epro_0436
Type II secretion system protein E.
 
  
 0.986
cpaB
Flp pilus assembly protein CpaB.
 
  
 0.985
Epro_0441
Hypothetical protein.
 
     0.779
Epro_0434
Exported protein of unknown function.
       0.727
Epro_0283
Type II and III secretion system protein; Belongs to the bacterial secretin family.
 
     0.712
Epro_0439
Exported protein of unknown function.
       0.594
Epro_0433
Hypothetical protein.
       0.559
Epro_0432
Exported protein of unknown function.
       0.548
ftsQ-2
Cell division protein FtsQ.
   
    0.469
Your Current Organism:
Endomicrobium proavitum
NCBI taxonomy Id: 1408281
Other names: Candidatus Endomicrobium sp. Rsa215, DSM 29378, E. proavitum, Endomicrobium proavitum Zheng et al. 2018, JCM 30189, JCM 32103, strain Rsa215
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.