STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Epro_0696Hypothetical protein. (1869 aa)    
Predicted Functional Partners:
tolB
Putative Protein TolB.
 
 
 0.843
lolC
Putative Lipoprotein-releasing system transmembrane protein LolC.
  
 
   0.690
yaeT
Outer membrane protein assembly factor YaeT.
  
 
 
 0.663
Epro_1152
Exported protein of unknown function.
  
     0.613
Epro_0884
Exported protein of unknown function.
  
 
 
 0.567
Epro_0826
Exported protein of unknown function.
 
 
 
 0.534
tolR
Putative Protein TolR.
  
 
 
 0.475
Epro_0745
Putative lipoprotein.
  
    0.425
Epro_0108
OmpA family protein.
  
     0.421
Epro_0219
Putative lipoprotein.
  
     0.419
Your Current Organism:
Endomicrobium proavitum
NCBI taxonomy Id: 1408281
Other names: Candidatus Endomicrobium sp. Rsa215, DSM 29378, E. proavitum, Endomicrobium proavitum Zheng et al. 2018, JCM 30189, JCM 32103, strain Rsa215
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.