STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hydC-2NAD-dependent Fe-hydrogenase 24kDa NADH dehydrogenase component. (160 aa)    
Predicted Functional Partners:
hydB
NAD-dependent FeFe-hydrogenase 51kDa NADH dehydrogenase component.
 0.999
hydB-2
NAD-dependent FeFe-hydrogenase 51kDa NADH dehydrogenase component.
 0.997
hydA
[FeFe]-hydrogenase, NADP-reducing hydrogenase large subunit.
 
 0.986
etfA
Electron transfer flavoprotein subunit alpha.
  
 0.888
echB
NADH dehydrogenase subunit H, ech hydrogenase subunit B.
  
 0.886
nuoK-2
NADH-ubiquinone oxidoreductase subunit 4L.
  
 
 0.849
hydA-2
[FeFe]-hydrogenase, NADP-reducing hydrogenase large subunit.
 
 0.843
ydbK
Putative 2-oxoacid-flavodoxin fused oxidoreductase:conserved protein.
   
 
 0.826
Epro_0736
Ferredoxin.
 
 
 0.774
echF
4Fe-4S ferredoxin, iron-sulfur binding domain protein (modular protein) ech hydrogenase subunit F.
  
 0.762
Your Current Organism:
Endomicrobium proavitum
NCBI taxonomy Id: 1408281
Other names: Candidatus Endomicrobium sp. Rsa215, DSM 29378, E. proavitum, Endomicrobium proavitum Zheng et al. 2018, JCM 30189, JCM 32103, strain Rsa215
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