STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tolBPutative Protein TolB. (430 aa)    
Predicted Functional Partners:
Epro_0745
Putative lipoprotein.
 
  
 0.962
pal
Peptidoglycan-associated lipoprotein; Belongs to the Pal lipoprotein family.
 
 
 0.945
tonB
TonB family protein.
 
 
 
 0.910
tolR
Putative Protein TolR.
 
  
 0.864
Epro_0696
Hypothetical protein.
 
 
 0.843
tolQ
Putative Transporter, MotA/TolQ/ExbB proton channel family protein.
  
  
 0.820
lolC
Putative Lipoprotein-releasing system transmembrane protein LolC.
  
  
 0.709
Epro_0740
Membrane protein of unknown function.
       0.699
Epro_0738
Conserved membrane protein of unknown function.
  
    0.631
Epro_0739
Putative transcriptional regulator, Crp/Fnr family.
       0.629
Your Current Organism:
Endomicrobium proavitum
NCBI taxonomy Id: 1408281
Other names: Candidatus Endomicrobium sp. Rsa215, DSM 29378, E. proavitum, Endomicrobium proavitum Zheng et al. 2018, JCM 30189, JCM 32103, strain Rsa215
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.